Publications


2020


Seneca Cardoso Da Silva J, Pjevac P, Canarini A, Herbold CW, Zioutis C, Dietrich M et al. Composition and activity of nitrifier communities in soil are unresponsive to elevated temperature and CO2, but strongly affected by drought. ISME Journal. 2020 Dec;14(12):3038-3053. Epub 2020 Aug 7. doi: 10.1038/s41396-020-00735-7

Daebeler A, Kitzinger K, Koch H, Herbold C, Steinfeder M, Schwarz J et al. Exploring the upper pH limits of nitrite oxidation: diversity, ecophysiology, and adaptive traits of haloalkalitolerant Nitrospira. ISME Journal. 2020 Dec;14(12):2967-2979. Epub 2020 Jul 24. doi: 10.1038/s41396-020-0724-1

Baune M, Kang K, Schenkeveld WDC, Kraemer SM, Hayen H, Weber G. Importance of oxidation products in coumarin-mediated Fe(hydr)oxide mineral dissolution. Biometals. 2020 Dec;33:305-321. Epub 2020 Oct 5. doi: 10.1007/s10534-020-00248-y

Zakem EJ, Polz MF, Follows MJ. Redox-informed models of global biogeochemical cycles. Nature Communications. 2020 Nov 10;11(1):5680. doi: 10.1038/s41467-020-19454-w

Polz MF, Cordero OX. The genetic law of the minimum. Science. 2020 Nov 6;370(6517):655-656. doi: 10.1126/science.abf2588

Sharma K, Palatinszky M, Nikolov G, Berry D, Shank EA. Transparent soil microcosms for live-cell imaging and non-destructive stable isotope probing of soil microorganisms. eLife. 2020 Nov 3;9:1-28. e56275. doi: 10.7554/eLife.56275

Lukumbuzya M, Kristensen JM, Kitzinger K, Pommerening-Röser A, Nielsen PH, Wagner M et al. A refined set of rRNA-targeted oligonucleotide probes for in situ detection and quantification of ammonia-oxidizing bacteria. Water Research. 2020 Nov 1;186:116372. doi: 10.1016/j.watres.2020.116372

Horn A, Köstlbacher S, Horn M. Chlamydiae in the environment. Trends in Microbiology. 2020 Nov 1;28(11):877-888. 11. doi: 10.1016/j.tim.2020.05.020, 10.1016/j.tim.2020.05.020

Wei X, Zhu Z, Liu Y, Luo Y, Deng Y, Xu X et al. C:N:P stoichiometry regulates soil organic carbon mineralization and concomitant shifts in microbial community composition in paddy soil. Biology and Fertility of Soils. 2020 Nov;56(8):1093-1107. Epub 2020 May 14. doi: 10.1007/s00374-020-01468-7, 10.1007/s00374-020-01468-7

Martin BC, Middleton JA, Fraser MW, Marshall IPG, Scholz VV, Hausl B et al. Cutting out the middle clam: lucinid endosymbiotic bacteria are also associated with seagrass roots worldwide. ISME Journal. 2020 Nov;14(11):2901-2905. Epub 2020 Sept 14. doi: 10.1038/s41396-020-00771-3

Willemsen A, van den Boom A, Dietz J, Bilge Dagalp S, Dogan F, Bravo IG et al. Genomic and phylogenetic characterization of ChPV2, a novel goat PV closely related to the Xi-PV1 species infecting bovines. Virology journal. 2020 Oct 30;17(1):167. doi: 10.1186/s12985-020-01440-9

Lang M, Baumgartner M, Rożalska A, Frick A, Riva A, Jarek M et al. Crypt residing bacteria and proximal colonic carcinogenesis in a mouse model of Lynch syndrome. International Journal of Cancer. 2020 Oct 15;147(8):2316-2326. 8. Epub 2020 Apr 29. doi: 10.1002/ijc.33028

Cardoso Pereira MDF, Wasmund K, Cobankovic I, Jehmlich N, Herbold CW, Lee KS et al. Rational design of a microbial consortium of mucosal sugar utilizers reduces Clostridiodes difficile colonization. Nature Communications. 2020 Oct 9;11(1):5104. doi: 10.1038/s41467-020-18928-1

Pascelli C, Laffy PW, Botté E, Kupresanin M, Rattei T, Lurgi M et al. Viral ecogenomics across the Porifera. Microbiome. 2020 Oct 2;8(1):144. Epub 2020 Oct 2. doi: 10.1186/s40168-020-00919-5

Crudo F, Aichinger G, Mihajlovic J, Dellafiora L, Varga E, Puntscher H et al. Gut microbiota and undigested food constituents modify toxin composition and suppress the genotoxicity of a naturally occurring mixture of Alternariatoxins in vitro. Archives of Toxicology. 2020 Oct;94(10):3541-3552. Epub 2020 Jul 4. doi: 10.1007/s00204-020-02831-1