Publications


2023


Engelberts JP, Robbins SJ, Herbold CW, Moeller FU, Jehmlich N, Laffy PW et al. Metabolic reconstruction of the near complete microbiome of the model sponge Ianthella basta. Environmental Microbiology. 2023 Mar;25(3):646-660. Epub 2022 Dec 8. doi: 10.1111/1462-2920.16302

Picard MAL, Leblay F, Cassan C, Willemsen A, Daron J, Bauffe F et al. Transcriptomic, proteomic, and functional consequences of codon usage bias in human cells during heterologous gene expression. Protein Science. 2023 Mar;32(3):e4576. Epub 2023 Jan 24. doi: 10.1002/pro.4576


Elsherbini J, Corzett C, Ravaglioli C, Tamburello L, Polz M, Bulleri F. Epilithic Bacterial Assemblages on Subtidal Rocky Reefs: Variation Among Alternative Habitats at Ambient and Enhanced Nutrient Levels. Microbial Ecology. 2023 Feb 15;86(3):1552-1564. doi: 10.1007/s00248-023-02174-1

Heinzle J, Kitzler B, Zechmeister-Boltenstern S, Tian Y, Kengdo SK, Wanek W et al. Soil CH4 and N2O response diminishes during decadal soil warming in a temperate mountain forest. Agricultural and Forest Meteorology. 2023 Feb 15;329:109287. doi: 10.1016/j.agrformet.2022.109287

Ågerstrand M, Arinaitwe K, Backhaus T, Barra RO, Diamond ML, Grimalt JO et al. Key Principles for the Intergovernmental Science-Policy Panel on Chemicals and Waste. Environmental Science & Technology. 2023 Feb 14;57(6):2205-2208. Epub 2023 Jan 30. doi: 10.1021/acs.est.2c08283

Lüftinger L, Májek P, Rattei T, Beisken S. Metagenomic Antimicrobial Susceptibility Testing from Simulated Native Patient Samples. Antibiotics. 2023 Feb 9;12(2):366. doi: 10.3390/antibiotics12020366

Halter T, Köstlbacher S, Rattei T, Hendrickx F, Manzano-Marín A, Horn M. One to host them all: genomics of the diverse bacterial endosymbionts of the spider Oedothorax gibbosus. Microbial genomics. 2023 Feb 9;9(2):000943. doi: 10.1101/2022.05.31.494226, 10.1099/mgen.0.000943

Doncheva NT, Morris JH, Holze H, Kirsch R, Nastou KC, Cuesta-Astroz Y et al. Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks. Journal of Proteome Research. 2023 Feb 3;22(2):637-646. doi: 10.1021/acs.jproteome.2c00651

Schalamun M, Beier S, Hinterdobler W, Wanko N, Schinnerl J, Brecker L et al. MAPkinases regulate secondary metabolism, sexual development and light dependent cellulase regulation in Trichoderma reesei. Scientific Reports. 2023 Feb 2;13(1):1912. doi: 10.1038/s41598-023-28938-w

Valles-Colomer M, Blanco-Míguez A, Manghi P, Asnicar F, Dubois L, Golzato D et al. The person-to-person transmission landscape of the gut and oral microbiomes. Nature. 2023 Feb 2;614(7946):125-135. doi: 10.1038/s41586-022-05620-1

Strachan CR, Yu XA, Neubauer V, Mueller AJ, Wagner M, Zebeli Q et al. Differential carbon utilization enables co-existence of recently speciated Campylobacteraceae in the cow rumen epithelial microbiome. Nature Microbiology. 2023 Feb 1;8(2):309-320. doi: 10.1038/s41564-022-01300-y

Crittenden PD, Ellis CJ, Smith RI, Wanek W, Thornton B. Loss of nitrogen fixing capacity in a montane lichen is linked to increased nitrogen deposition. Journal of Ecology. 2023 Feb 1;111(2):280-299. doi: 10.1111/1365-2745.14056

Sigmund G, Schmid A, Schmidt HP, Hagemann N, Bucheli TD, Hofmann T. Small biochar particles hardly disintegrate under cryo-stress. Geoderma: A Global Journal of Soil Science. 2023 Feb 1;430:116326. Epub 2023 Jan 6. doi: 10.1016/j.geoderma.2023.116326

Hodzic A, Dheilly NM, Cabezas-Cruz A, Berry D. The helminth holobiont: a multidimensional host-parasite-microbiota interaction. Trends in parasitology. 2023 Feb 1;39(2):91-100. Epub 2022 Dec 8. doi: 10.1016/j.pt.2022.11.012