Publications


2020


Lukumbuzya M, Kristensen JM, Kitzinger K, Pommerening-Röser A, Nielsen PH, Wagner M et al. A refined set of rRNA-targeted oligonucleotide probes for in situ detection and quantification of ammonia-oxidizing bacteria. Water Research. 2020 Nov 1;186:116372. doi: 10.1016/j.watres.2020.116372

Horn A, Köstlbacher S, Horn M. Chlamydiae in the environment. Trends in Microbiology. 2020 Nov 1;28(11):877-888. 11. doi: 10.1016/j.tim.2020.05.020, 10.1016/j.tim.2020.05.020

Wei X, Zhu Z, Liu Y, Luo Y, Deng Y, Xu X et al. C:N:P stoichiometry regulates soil organic carbon mineralization and concomitant shifts in microbial community composition in paddy soil. Biology and Fertility of Soils. 2020 Nov;56(8):1093-1107. Epub 2020 May 14. doi: 10.1007/s00374-020-01468-7, 10.1007/s00374-020-01468-7

Martin BC, Middleton JA, Fraser MW, Marshall IPG, Scholz VV, Hausl B et al. Cutting out the middle clam: lucinid endosymbiotic bacteria are also associated with seagrass roots worldwide. ISME Journal. 2020 Nov;14(11):2901-2905. Epub 2020 Sept 14. doi: 10.1038/s41396-020-00771-3

Willemsen A, van den Boom A, Dietz J, Bilge Dagalp S, Dogan F, Bravo IG et al. Genomic and phylogenetic characterization of ChPV2, a novel goat PV closely related to the Xi-PV1 species infecting bovines. Virology journal. 2020 Oct 30;17(1):167. doi: 10.1186/s12985-020-01440-9

Lang M, Baumgartner M, Rożalska A, Frick A, Riva A, Jarek M et al. Crypt residing bacteria and proximal colonic carcinogenesis in a mouse model of Lynch syndrome. International Journal of Cancer. 2020 Oct 15;147(8):2316-2326. 8. Epub 2020 Apr 29. doi: 10.1002/ijc.33028

Cardoso Pereira MDF, Wasmund K, Cobankovic I, Jehmlich N, Herbold CW, Lee KS et al. Rational design of a microbial consortium of mucosal sugar utilizers reduces Clostridiodes difficile colonization. Nature Communications. 2020 Oct 9;11(1):5104. doi: 10.1038/s41467-020-18928-1

Pascelli C, Laffy PW, Botté E, Kupresanin M, Rattei T, Lurgi M et al. Viral ecogenomics across the Porifera. Microbiome. 2020 Oct 2;8(1):144. Epub 2020 Oct 2. doi: 10.1186/s40168-020-00919-5

Crudo F, Aichinger G, Mihajlovic J, Dellafiora L, Varga E, Puntscher H et al. Gut microbiota and undigested food constituents modify toxin composition and suppress the genotoxicity of a naturally occurring mixture of Alternariatoxins in vitro. Archives of Toxicology. 2020 Oct;94(10):3541-3552. Epub 2020 Jul 4. doi: 10.1007/s00204-020-02831-1

Di Cesare A, Pjevac P, Eckert E, Curkov N, Miko Šparica M, Corno G et al. The role of metal contamination in shaping microbial communities in heavily polluted marine sediments. Environmental Pollution. 2020 Oct;265(Part B):114823. doi: 10.1016/j.envpol.2020.114823

Frommeyer B, Fiedler AW, Oehler SR, Hanson BT, Loy A, Franchini P et al. Environmental and Intestinal Phylum Firmicutes Bacteria Metabolize the Plant Sugar Sulfoquinovose via a 6-Deoxy-6-sulfofructose Transaldolase Pathway. Iscience. 2020 Sept 25;23(9):101510. doi: 10.1016/j.isci.2020.101510

Brünjes RM, Hofmann T. Anthropogenic gadolinium in freshwater and drinking water systems. Water Research. 2020 Sept 1;182:115966. Epub 2020 May 29. doi: 10.1016/j.watres.2020.115966

Herrera P, Schuster L, Wentrup C, König L, Kempinger T, Na H et al. Molecular causes of an evolutionary shift along the parasitism-mutualism continuum in a bacterial symbiont. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 2020 Sept 1;117(35):21658-21666. Epub 2020 Aug 19. doi: 10.1073/pnas.2005536117

Svendsen C, Walker LA, Matzke M, Lahlve E, Harrison S, Crossley A et al. Key principles and operational practices for improved nanotechnology environmental exposure assessment. Nature Nanotechnology. 2020 Sept;15(9):731-742. Epub 2020 Aug 17. doi: 10.1038/s41565-020-0742-1

Canarini A, Wanek W, Watzka M, Sanden T, Spiegel H, Santrucek J et al. Quantifying microbial growth and carbon use efficiency in dry soil environments via (18)O water vapor equilibration. Global Change Biology. 2020 Sept;26(9):5333-5341. doi: 10.1111/gcb.15168