Publications


2013


Goudenège D, Labreuche Y, Krin E, Ansquer D, Mangenot S, Calteau A et al. Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits. The ISME Journal. 2013 Oct;7(10):1985-96. doi: 10.1038/ismej.2013.90

Polz MF, Alm EJ, Hanage WP. Horizontal gene transfer and the evolution of bacterial and archaeal population structure. Trends in Genetics. 2013 Mar;29(3):170-5. doi: 10.1016/j.tig.2012.12.006

Szabo G, Preheim SP, Kauffman KM, David LA, Shapiro J, Alm EJ et al. Reproducibility of Vibrionaceae population structure in coastal bacterioplankton. The ISME Journal. 2013 Mar;7(3):509-19. doi: 10.1038/ismej.2012.134

2012


Materna AC, Friedman J, Bauer C, David C, Chen S, Huang IB et al. Shape and evolution of the fundamental niche in marine Vibrio. The ISME Journal. 2012 Dec;6(12):2168-77. doi: 10.1038/ismej.2012.65

Manzano-Marín A, Lamelas A, Moya A, Latorre A. Comparative genomics of Serratia spp.: two paths towards endosymbiotic life. PLoS ONE. 2012 Oct 15;7(10):e47274. doi: 10.1371/journal.pone.0047274

Cordero OX, Wildschutte H, Kirkup B, Proehl S, Ngo L, Hussain F et al. Ecological populations of bacteria act as socially cohesive units of antibiotic production and resistance. Science (New York, N.Y.). 2012 Sept 7;337(6099):1228-31. doi: 10.1126/science.1219385

Shapiro BJ, Friedman J, Cordero OX, Preheim SP, Timberlake SC, Szabó G et al. Population genomics of early events in the ecological differentiation of bacteria. Science (New York, N.Y.). 2012 Apr 6;336(6077):48-51. doi: 10.1126/science.1218198

Wollenberg MS, Preheim SP, Polz MF, Ruby EG. Polyphyly of non-bioluminescent Vibrio fischeri sharing a lux-locus deletion. Environmental Microbiology. 2012 Mar;14(3):655-68. doi: 10.1111/j.1462-2920.2011.02608.x

2011


John SG, Mendez CB, Deng L, Poulos B, Kauffman AKM, Kern S et al. A simple and efficient method for concentration of ocean viruses by chemical flocculation. Environmental Microbiology Reports. 2011 Apr;3(2):195-202. doi: 10.1111/j.1758-2229.2010.00208.x

Wang L, Chen S, Vergin KL, Giovannoni SJ, Chan SW, DeMott MS et al. DNA phosphorothioation is widespread and quantized in bacterial genomes. Proceedings of the National Academy of Sciences of the United States of America. 2011 Feb 15;108(7):2963-8. doi: 10.1073/pnas.1017261108

Preheim SP, Boucher Y, Wildschutte H, David LA, Veneziano D, Alm EJ et al. Metapopulation structure of Vibrionaceae among coastal marine invertebrates. Environmental Microbiology. 2011 Jan;13(1):265-275. doi: 10.1111/j.1462-2920.2010.02328.x

Boucher Y, Cordero OX, Takemura A, Hunt DE, Schliep K, Bapteste E et al. Local mobile gene pools rapidly cross species boundaries to create endemicity within global Vibrio cholerae populations. mBio. 2011;2(2). doi: 10.1128/mBio.00335-10

2010


Wildschutte H, Preheim SP, Hernandez Y, Polz MF. O-antigen diversity and lateral transfer of the wbe region among Vibrio splendidus isolates. Environmental Microbiology. 2010 Nov;12(11):2977-87. doi: 10.1111/j.1462-2920.2010.02274.x

Man-Aharonovich D, Philosof A, Kirkup BC, Le Gall F, Yogev T, Berman-Frank I et al. Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts. The ISME Journal. 2010 Aug;4(8):1044-52. doi: 10.1038/ismej.2010.25

Kirkup BC, Chang L, Chang S, Gevers D, Polz MF. Vibrio chromosomes share common history. BMC Microbiology. 2010 May 10;10:137. doi: 10.1186/1471-2180-10-137

2009


Le Roux F, Zouine M, Chakroun N, Binesse J, Saulnier D, Bouchier C et al. Genome sequence of Vibrio splendidus: an abundant planctonic marine species with a large genotypic diversity. Environmental Microbiology. 2009 Aug;11(8):1959-70. doi: 10.1111/j.1462-2920.2009.01918.x